DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42339 and mspo

DIOPT Version :9

Sequence 1:NP_572674.3 Gene:CG42339 / 32033 FlyBaseID:FBgn0259241 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001286427.1 Gene:mspo / 36632 FlyBaseID:FBgn0020269 Length:601 Species:Drosophila melanogaster


Alignment Length:56 Identity:25/56 - (44%)
Similarity:35/56 - (62%) Gaps:1/56 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DCQVGDWGAWSECDRSCGTGMMTRNRQILQAAQNGGKHCPTLQQKRSCQGYR-CHG 137
            ||:|..|..|:.|.:|||.|.|.|.|::::..:.||:.||.|||.:.|...| |||
  Fly   534 DCRVSHWSEWTACSKSCGVGEMHRYRKVIKHGKRGGRQCPALQQSKWCGTERNCHG 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42339NP_572674.3 Somatomedin_B <53..79 CDD:279385
TSP1 86..136 CDD:214559 20/50 (40%)
mspoNP_001286427.1 Spond_N 120..363 CDD:283999
TSP1 537..588 CDD:214559 20/50 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3539
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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