DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG42339 and CG17739

DIOPT Version :9

Sequence 1:	NP_572674.3	Gene:	CG42339 / 32033	FlyBaseID:	FBgn0259241	Length:	395	Species:	Drosophila melanogaster
Sequence 2:	NP_610757.1	Gene:	CG17739 / 36333	FlyBaseID:	FBgn0033710	Length:	873	Species:	Drosophila melanogaster

Alignment Length:	162	Identity:	45/162 - (27%)
Similarity:	62/162 - (38%)	Gaps:	62/162 - (38%)

- Green bases have known domain annotations that are detailed below.

  Fly    26 CREAQL-----CCNGRDSSCVVQKAPINAII-----EDLSDKPC---------YCDH----ACLK 67
            ||..:|     |.|   .||       :.|:     ::|:|.||         |.||    ..:.
  Fly   638 CRHIKLHEEVNCTN---PSC-------DTIVPGFCYDELTDSPCRDNDVANFWYYDHVSDQCAIY 692

  Fly    68 LGDCCD----DFK------------------DHCGV--LDCQVGDWGAWSECDRSCGTGMMTRNR 108
            ..|.||    .||                  .|.|:  :||.|.||.:.| |:.|||.|...|.|
  Fly   693 WSDRCDTNRNKFKSKEECEETCRLPRHKQELQHDGIPAIDCLVSDWVSHS-CNASCGDGFQLRTR 756

  Fly   109 QILQAAQNGGKHCPTLQQKRSCQGYRCHGHHD 140
            ::|:..:.|||.||    |...:..||:...|
  Fly   757 RVLRTPKYGGKPCP----KHLVRLDRCYQRCD 784

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG42339	NP_572674.3	Somatomedin_B	<53..79	CDD:279385	12/60 (20%)
CG42339	NP_572674.3	TSP1	86..136	CDD:214559	19/49 (39%)
CG17739	NP_610757.1	Reeler	23..163	CDD:260081
		Spond_N	186..373	CDD:283999
		TSP1	412..460	CDD:214559
		TSP1	490..541	CDD:214559
		KU	661..715	CDD:294074	12/53 (23%)
		TSP_1	815..862	CDD:278517
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3539
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900