DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42339 and si:dkey-178e17.3

DIOPT Version :9

Sequence 1:NP_572674.3 Gene:CG42339 / 32033 FlyBaseID:FBgn0259241 Length:395 Species:Drosophila melanogaster
Sequence 2:XP_005166797.1 Gene:si:dkey-178e17.3 / 100535682 ZFINID:ZDB-GENE-081104-335 Length:253 Species:Danio rerio


Alignment Length:381 Identity:85/381 - (22%)
Similarity:123/381 - (32%) Gaps:176/381 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 CCNGRDSSCVVQKAPINAIIEDLSDKP-----CYCDHACLKLGDCCDDFKDHCGV---LDCQVGD 88
            ||.||::.|              ||:.     ||||..|.:.||||:|:...|.|   .||:|..
Zfish    32 CCPGRNNDC--------------SDRSFRRTVCYCDTYCRRSGDCCEDYNTVCHVSAAKDCEVTL 82

  Fly    89 WGAWSECDRSCGTGMMTRNRQILQAAQNGGKHCPTLQQKRSC--QGYRCHGHHDKKILREMALLL 151
            |||||.|...||.|...|:||:....:|||..||.|:|:|.|  ....|      ...:|:|.:|
Zfish    83 WGAWSPCSSVCGAGTTERSRQVATPPRNGGTPCPDLKQRRGCFAPTDTC------SAAKEVAKIL 141

  Fly   152 PAALTHNHHVNESGDLRHNLRTRYRDTYKHNH------DQEYCVEFEVIKSSKACNKLPPYNLMT 210
            |.:...|                ::|.::..|      .:.|||:..|.::|.|| |:.|::...
Zfish   142 PDSFKRN----------------FKDPWRRPHMLMKEEKKSYCVQMRVKQASAAC-KVRPWSAGL 189

  Fly   211 EGDR-ITVRCDLEALIQDSAGSSTTARTPQGPTTPSTTTVSSAASAFGQRTDDLEEERLQRETSS 274
            ..:| :.|.|..:|:                                                  
Zfish   190 IHERSVCVECQSDAM-------------------------------------------------- 204

  Fly   275 EEEATNQDGEAEEEDEEPEQDEQDDLQNALDSDSNESTDYRHQRQSQMSQMSHSRRTAGKRSAVP 339
                                                :||.|                        
Zfish   205 ------------------------------------ATDNR------------------------ 209

  Fly   340 ATPSPTLPPTYHCRGEGLAGRTTRWSALPAPSCRGKWLRLTVGPPKKCGHAQFIFV 395
                        |||:||....|.|:|..||.|.|.|:|.::....:|.....|||
Zfish   210 ------------CRGDGLQNIRTFWAAAQAPGCSGSWVRESLTENCRCPSYSVIFV 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42339NP_572674.3 Somatomedin_B <53..79 CDD:279385 12/30 (40%)
TSP1 86..136 CDD:214559 22/51 (43%)
si:dkey-178e17.3XP_005166797.1 Somatomedin_B 31..70 CDD:279385 17/51 (33%)
TSP1 80..>121 CDD:214559 19/40 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577412
Domainoid 1 1.000 55 1.000 Domainoid score I11168
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D390796at33208
OrthoFinder 1 1.000 - - FOG0003374
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106929
Panther 1 1.100 - - LDO PTHR20920
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3505
SonicParanoid 1 1.000 - - X2727
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
109.880

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