DRSC/TRiP Functional Genomics Resources

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Protein Alignment C901 and nid-1

DIOPT Version :9

Sequence 1:NP_572673.1 Gene:C901 / 32032 FlyBaseID:FBgn0021742 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_001256465.1 Gene:nid-1 / 179770 WormBaseID:WBGene00003738 Length:1584 Species:Caenorhabditis elegans


Alignment Length:624 Identity:122/624 - (19%)
Similarity:179/624 - (28%) Gaps:313/624 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 NSNIPLWKQRACEKSQKQRQNAHYVCDEKGDFKCLPGWQGDLCQVPMCRRGCDPMNGYCQRPGEC 101
            |:|||....:||         ..||||...:  |:|                :|..|     .||
 Worm   825 NANIPQRGGQAC---------GSYVCDVNAE--CMP----------------EPSGG-----SEC 857

  Fly   102 RCRIGYS-------------------------------GELC---DKCIPLPGCQHG-------- 124
            .|:.|:|                               |::|   |:|     .:||        
 Worm   858 VCKAGFSGNGVTCESLLDDRHAHSSHNRHEQQQQTGSLGKVCRSHDEC-----SEHGSCAYHHSL 917

  Fly   125 -----GCTKP--------------------------------------------FECICKPGWA- 139
                 .||:|                                            |.|:|:.|:. 
 Worm   918 GYYQCACTEPYVGNGVECTLPGSSASAPELGCDVTRDCSEFADCVYERSSTGATFRCVCQSGYTG 982

  Fly   140 -GLFC------------------TEP------SCRTGC----------HSTRGYCEAPGECRCRI 169
             |.:|                  :||      ||...|          |: |.|     .|.|..
 Worm   983 DGKYCMQSQLAISAISPSVPQLPSEPAVLSTASCNPNCGPDAQCVYDDHN-RQY-----RCECYA 1041

  Fly   170 GYAG------------------RTC---SECATMPGC---QHGTCNKPLECLCLPGYTG---LLC 207
            .:.|                  :||   |:|.....|   :||.  ....|.||||::|   :.|
 Worm  1042 AFMGDGYNCVPLAKPNMVPAQPKTCVESSDCHINGHCVINEHGA--GEYICQCLPGFSGDGFINC 1104

  Fly   208 ----QTPICDPDCSKQHGYC-----RKPGECRCKVGWTGSQCDKCFPY---PGC--------ANG 252
                |....:|....|:.:|     .....|:|..|:.|.. ..|.||   ..|        ||.
 Worm  1105 RGADQCNPSNPSACYQNAHCVYDAILNAHACKCVDGFKGDG-TSCVPYAPATNCNLEPRICHANA 1168

  Fly   253 DC-----EAPWECNCHPGWGG---MLCDEKLT----------YCVEHPDT----CE-------NG 288
            .|     ...:||.|.||..|   ..||...|          ||.::|.:    |:       ||
 Worm  1169 QCVMHHDTNAYECICKPGSSGDGYTKCDVIETPRCTNCSIHAYCAQNPTSGAYQCKCNAGYNGNG 1233

  Fly   289 GKCTSLSR-----------------EDGSYQCQCRQGFL--GKNC----EIRDDFLLTSEAPPRI 330
            ..|.|:|.                 |.|.|.|.|..|:.  |::|    ..|.|.||.:.     
 Worm  1234 HLCVSMSSCLDDRSLCDENADCVPGEAGHYVCNCHYGYHGDGRSCSPESSTRSDKLLVAR----- 1293

  Fly   331 TPPTPAELVLELDGELDQNGQQDIGAGVPDDSEPGGGLVGEKLPAGNEPERRKNDTVANVATAGT 395
                 ...:.|.....|:.|:|.|             ::...:|.|.:.:.::...|        
 Worm  1294 -----GMAIFERSTNPDEYGKQLI-------------VIPHHIPVGIDFDCKEEKIV-------- 1332

  Fly   396 GAGAGPMNSLPGNSNATRTTLVVATETGSDNATNEALSA 434
                  .:.:.|:|  .||:.:..||..|  ..|:.||:
 Worm  1333 ------WSDMSGHS--IRTSSLNGTEHKS--YFNKELSS 1361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C901NP_572673.1 DSL <56..79 CDD:302925 6/22 (27%)
EGF_CA 280..315 CDD:238011 15/68 (22%)
nid-1NP_001256465.1 NIDO 93..232 CDD:214712
G2F 398..629 CDD:214774
EGF_3 712..747 CDD:289699
EGF_3 841..870 CDD:289699 11/51 (22%)
EGF_CA 954..987 CDD:304395 5/32 (16%)
EGF_CA 1205..1236 CDD:304395 6/30 (20%)
EGF_3 1242..1278 CDD:289699 7/35 (20%)
NHL <1319..1513 CDD:302697 13/61 (21%)
NHL repeat 1319..1354 CDD:271320 10/52 (19%)
NHL repeat 1362..1399 CDD:271320 122/624 (20%)
NHL repeat 1402..1445 CDD:271320
NHL repeat 1450..1482 CDD:271320
NHL repeat 1490..1513 CDD:271320
FXa_inhibition 1553..>1580 CDD:291342
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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