DRSC/TRiP Functional Genomics Resources

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Protein Alignment C901 and apx-1

DIOPT Version :10

Sequence 1:NP_572673.1 Gene:C901 / 32032 FlyBaseID:FBgn0021742 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_503882.2 Gene:apx-1 / 178759 WormBaseID:WBGene00000168 Length:515 Species:Caenorhabditis elegans


Alignment Length:557 Identity:112/557 - (20%)
Similarity:170/557 - (30%) Gaps:218/557 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LEEMNAYRRNFDARQSSNSNIPLWKQRACEKSQKQRQNAHYVCDEKGDFKCLPGWQGDLCQVPMC 84
            :|....:......|...:||   :..:.|.:........|:.|...|..:|..||.|:.|..|:|
 Worm   116 IETSRGFNVTVQLRNLCSSN---YHGKRCNRYCIANAKLHWECSTHGVRRCSAGWSGEDCSNPIC 177

  Fly    85 RRGCDPMNGYCQRPGECRCRIGYSGELCDKCIPLPGCQHGGCTKPFECICKPGWAGLFCTEPSCR 149
            ..||. ..|.|..|.:|.|..|::|..|::|:|..||.:|.|..                     
 Worm   178 AGGCS-NRGRCVAPNQCSCADGFNGTRCEQCLPRAGCVNGDCVN--------------------- 220

  Fly   150 TGCHSTRGYCEAPGECRCRIGYAGRTC----SECATMPGCQHGTCNKPLECLCLPGYTGLLCQTP 210
                      |.|..|:||.|:.|..|    ..|:....|.:|                     .
 Worm   221 ----------ETPNTCKCRDGFIGDRCDIDIKICSLEKPCANG---------------------G 254

  Fly   211 ICDPDCSKQHGYCRKPGECRCKVGWTGSQCDKCFPYPGCANGDCEAPWECNCHPGWGGMLCDEKL 275
            ||..|.|...||     :|.|...:.|||              |:.|.              .|:
 Worm   255 ICSIDSSSSTGY-----KCHCPFEFVGSQ--------------CKTPL--------------SKV 286

  Fly   276 TYCVEHPDTCENGGKCTSLSREDGSYQCQCRQGFLGKNCEI------------------------ 316
            ....||  .|:|||.|  :|.:|.:.||:||:||.||.|||                        
 Worm   287 RCSAEH--VCKNGGAC--ISMDDTNIQCKCRRGFSGKFCEIGNHGDCSAMRCSAGETCQISGDFA 347

  Fly   317 ----RDDFLLTSEAPPRITPPTPAELVLELDGELDQNGQQDIGAGVPDDSEPGGGLVGEKLPAGN 377
                .|:.|||:..|...|                                       :.:....
 Worm   348 ICVENDELLLTTNKPAETT---------------------------------------KSVEKWR 373

  Fly   378 EPERRKNDTVA----------------NVATAGTGAGA--GPMNSL-----PGNSNATRTTLVVA 419
            ||.:..||..|                :|...|....:  ..|:|.     |.:..|..:|::..
 Worm   374 EPRKTANDEQASDELQLRLIAAICVLFSVCVIGLALVSFFFYMHSFSKWKHPSSQQAGGSTILPT 438

  Fly   420 TETGSDNATNEALSAVTTRRATPI-PLTSGEKTVKGNATSVSVATGPQPRPPLPIVASQEQTIAN 483
            |       |:..:|..::...:|: .:...:...:|||...|..:.|....|.|           
 Worm   439 T-------TSIPMSTTSSGTGSPVYKVCIIDSEHRGNAPGSSSDSEPDHHCPPP----------- 485

  Fly   484 LAPAGTVTVTATTAPTATTAATSVTSHKDKPNVADEE 520
                        ...:...|.:|:..:|..|..||:|
 Worm   486 ------------HRHSPPPAYSSLVLYKKVPMAADDE 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C901NP_572673.1 DSL <56..82 CDD:473190 8/25 (32%)
EGF_CA 280..315 CDD:238011 17/34 (50%)
apx-1NP_503882.2 DSL 108..172 CDD:473190 12/58 (21%)

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