DRSC/TRiP Functional Genomics Resources

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Protein Alignment C901 and jag1b

DIOPT Version :10

Sequence 1:NP_572673.1 Gene:C901 / 32032 FlyBaseID:FBgn0021742 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_571938.2 Gene:jag1b / 140423 ZFINID:ZDB-GENE-011128-4 Length:1213 Species:Danio rerio


Alignment Length:387 Identity:119/387 - (30%)
Similarity:157/387 - (40%) Gaps:97/387 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 CEKSQKQRQN--AHYVCDEKGDFKCLPGWQGDLCQVPMCRRGCDPMNGYCQRPGECRCRIGYSGE 110
            |.|..:.|..  .||.||:.|:..||.||.|..|...:||:||...:|.|::||.|:|..|:.|.
Zfish   193 CNKFCRPRDEFFGHYTCDQNGNKTCLEGWTGPDCNTAICRQGCSTEHGSCKQPGGCKCLYGWQGP 257

  Fly   111 LCDKCIPLPGCQHGGCTKPFECICKPGWAGLFCTEPSCRTGCHS---TRGYCEAPG----ECRCR 168
            .||||||.|||.||.|.:|::|:|...|.|..|.:.....|.|.   ..|.|...|    :|.|.
Zfish   258 YCDKCIPHPGCVHGTCVEPWQCLCDTNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCE 322

  Fly   169 IGYAGRTCSE----CATMPGCQHGTC---NKPLECLCLPGYTGLLCQTPI--CDPDCSKQHGYCR 224
            .||:|..|..    |.:.|....|||   ::..||.|..|::|..|:..:  |.|:..|..|.|:
Zfish   323 DGYSGVNCERAEHACLSNPCANGGTCKETSQGYECHCAIGWSGTSCEINVDDCTPNQCKHGGTCQ 387

  Fly   225 ---KPGECRCKVGWTGSQC--------DK----------------CFPYPG-------------- 248
               ...:|.|...|||..|        ||                |...||              
Zfish   388 DLVNGFKCACPPHWTGKTCQIDANECEDKPCVNAKSCHNLIGAYFCECLPGWSGQNCDININDCK 452

  Fly   249 --CANG----DCEAPWECNCHPGWGGMLCDEKLTYCVEHPDTCENGGKCTSLSREDGSYQCQCRQ 307
              |.||    |....:.|.|.||:.|..|::.:..|...|  |.|||:|..   |...:||.|..
Zfish   453 GQCLNGGTCKDLVNGYRCLCPPGYTGEQCEKDVDECASSP--CLNGGRCQD---EVNGFQCLCPA 512

  Fly   308 GFLGKNCEIRDDFLLTSEAPPRITPPTPAELVLELDGELDQNGQQ------DIGAGVPDDSE 363
            ||.|:.|::..|:          ..|.|.           |||.|      |.....|||.|
Zfish   513 GFSGQLCQLDIDY----------CKPNPC-----------QNGAQCFNLASDYFCKCPDDYE 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C901NP_572673.1 DSL <56..82 CDD:473190 11/27 (41%)
EGF_CA 280..315 CDD:238011 13/34 (38%)
jag1bNP_571938.2 MNNL 29..182 CDD:462222
DSL 164..226 CDD:128366 13/32 (41%)
EGF_CA 293..331 CDD:238011 10/37 (27%)
EGF 337..365 CDD:394967 9/27 (33%)
EGF_CA 371..407 CDD:238011 10/35 (29%)
EGF_CA 409..444 CDD:238011 5/34 (15%)
EGF_CA 447..482 CDD:238011 9/34 (26%)
EGF_CA 484..520 CDD:238011 14/40 (35%)
EGF_CA 522..557 CDD:238011 12/53 (23%)
EGF_CA 626..662 CDD:238011
EGF_CA 664..699 CDD:238011
EGF 706..736 CDD:394967
EGF 745..775 CDD:394967
EGF_CA 779..814 CDD:238011
EGF_CA 817..853 CDD:238011
VWC_out 860..927 CDD:214565
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1181..1202
Blue background indicates that the domain is not in the aligned region.

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