DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RAB3D

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_004274.1 Gene:RAB3D / 9545 HGNCID:9779 Length:219 Species:Homo sapiens


Alignment Length:161 Identity:72/161 - (44%)
Similarity:103/161 - (63%) Gaps:0/161 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            :||:||:|::|:..|||:..|.|::|:.||...|.|||:||:|:.|....:.:.||||||||.||
Human    19 FDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQER 83

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            ::::..:|||||.|.||:|||.:.:||..:..|..:|:..|.::..|:|||||||..|.|.|..|
Human    84 YRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAE 148

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNML 164
            .|...|:.....|:|.|||...||..||..|
Human   149 DGRRLADDLGFEFFEASAKENINVKQVFERL 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 70/157 (45%)
RAB3DNP_004274.1 Rab3 22..186 CDD:206657 70/158 (44%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P63012 49..58 4/8 (50%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P63012 80..96 7/15 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 190..219
Blue background indicates that the domain is not in the aligned region.

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