DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab9Fb and YPT31

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_010948.1 Gene:YPT31 / 856753 SGDID:S000000833 Length:223 Species:Saccharomyces cerevisiae


Alignment Length:220 Identity:86/220 - (39%)
Similarity:123/220 - (55%) Gaps:15/220 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            ||.||||:::||.|||||.||.||:.|.|......|:|::|..|.:|:.|:.:..|||||||.||
Yeast    10 YDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQER 74

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            ::::..:|||||.|.|:||||:.|.|:.|.:.||.|:|..:.::|.|.|:|||.|....|.|..|
Yeast    75 YRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTE 139

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIH-------TPNRLSGGQETEDTAE 191
            :...:|....|.|.|.||.:..||:..|..|...||.::..|       :.|..:.|      |.
Yeast   140 ESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQKVSKHQMDLGDSSANGNANG------AS 198

  Fly   192 PPDEP-INLAGKDRQRAK-DSNTCC 214
            .|:.| |:|.....:..| :.|.||
Yeast   199 APNGPTISLTPTPNENKKANGNNCC 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 68/156 (44%)
YPT31NP_010948.1 Rab11_like 11..175 CDD:206660 71/163 (44%)

Return to query results.
Submit another query.