DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and YPT11

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_014095.2 Gene:YPT11 / 855412 SGDID:S000005248 Length:417 Species:Saccharomyces cerevisiae


Alignment Length:333 Identity:71/333 - (21%)
Similarity:123/333 - (36%) Gaps:135/333 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KILVLGDIGVGKSCLLM-----------------------------------------------R 26
            |:|::||..|||:.:::                                               |
Yeast    92 KLLLIGDANVGKTAMILSYCRELLTRAEMSRSARLRHQQQQQHKDLGLKKTVVNHRLSMKEKRKR 156

  Fly    27 FSDNRFTEK-----HVC-------------------------------TVGMDFRVRNVELAGRM 55
            :|.|.|.::     |..                               |:|:|.:...|.:..|.
Yeast   157 YSSNDFEKEFKDINHFADETSDFGNPNIGDDNNHEMADPNEIVIETRSTIGIDIKTNLVNIDNRF 221

  Fly    56 VMLQIWDTAGDERFK-SLLPSYYRGAHGILLVYDITSSKSFRN-IDGWL-KEIRRMSSESV---N 114
            ..:.:|||||.||:: :::||.|:..:.::|.||||::|||:: ::.|: :.:...||:.:   .
Yeast   222 FNVILWDTAGQERYQNAIIPSLYKKTNAVILTYDITNAKSFQSCMERWIVQALENFSSQDLLKAR 286

  Fly   115 VMLVGNKCDDLDNRQV------------RMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVG 167
            ..|||||.|....|||            :::.|...:     |.:|||.|....|....||:.:.
Yeast   287 FFLVGNKIDLYKERQVTHYDVVQMVQEMQLKHGIKIS-----GNFEVSCKWVNVVERTMNMIILD 346

  Fly   168 IYNR---------LVIHTPNRLSG-GQETEDTAEPPDEPINLAGKDRQRAKDSNT---------- 212
            :...         :.|.|.:.:.| .||..||.|   ||.|...:.:.:.:.:||          
Yeast   347 LVENGCFENNDPCVSITTSDDVQGHEQEFHDTVE---EPFNFTRQRQHQLEKNNTVDITKPNDDI 408

  Fly   213 ------CC 214
                  ||
Yeast   409 ANNQSICC 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 56/256 (22%)
YPT11NP_014095.2 Rab 196..331 CDD:206640 40/139 (29%)

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