DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and YPT10

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_009823.2 Gene:YPT10 / 852567 SGDID:S000000468 Length:199 Species:Saccharomyces cerevisiae


Alignment Length:169 Identity:52/169 - (30%)
Similarity:93/169 - (55%) Gaps:16/169 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAG------RMVMLQIWDTAGDE 67
            |:::|||..|||:.::.|....:|..||..|:|..|..:.:|:..      :.:.::||||||.|
Yeast     6 KVVLLGDSSVGKTSIVTRLKSGKFLAKHAATIGAAFITKTIEVPSNDSSTEKRIHMEIWDTAGQE 70

  Fly    68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCD---DLDNRQ 129
            |:|||:|.|||.|:..|:|:::....|.:....|.::::. .::...|::||||.|   :..:.:
Yeast    71 RYKSLVPMYYRDANIALIVFELGDVSSLQCAKTWFQDLQD-RAQGTQVIIVGNKYDLVCEEHSGE 134

  Fly   130 VRMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGI 168
            |.:.     |..:.|.:..||||:|.|. |..|.:.:.:
Yeast   135 VTIP-----AELQGLPYVAVSAKTGYNF-DTLNKIIISL 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 52/164 (32%)
YPT10NP_009823.2 Rab 5..158 CDD:206640 50/158 (32%)

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