DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and YPT6

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_013363.1 Gene:YPT6 / 850966 SGDID:S000004252 Length:215 Species:Saccharomyces cerevisiae


Alignment Length:210 Identity:78/210 - (37%)
Similarity:118/210 - (56%) Gaps:21/210 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSL 72
            :||:.||:.||||:.|:.||..:.|.:.:..|:|:||..:.:.|..:.:.||:|||||.|||:||
Yeast    11 YKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSL 75

  Fly    73 LPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIR-RMSSESVNVMLVGNKCDDLDNRQVRMEQGF 136
            :|||.|.:...::|||||..|||..||.|::::: ....|:|.:.:||||.|..|.||:..|:|.
Yeast    76 IPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEGE 140

  Fly   137 NYANHRALG---FYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPD-EPI 197
            ..|  :.||   |.|.|.|:|.||..:|..::            ..|...|.:|.|  |.| |..
Yeast   141 KKA--KLLGAKIFMETSTKAGYNVKALFKKIA------------KSLPEFQNSEST--PLDSENA 189

  Fly   198 NLAGKDRQRAKDSNT 212
            |.|.:::....|.:|
Yeast   190 NSANQNKPGVIDIST 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 67/160 (42%)
YPT6NP_013363.1 Rab6 11..173 CDD:206654 67/175 (38%)

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