DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab9Fb and YPT1

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_116615.1 Gene:YPT1 / 850505 SGDID:S000001856 Length:206 Species:Saccharomyces cerevisiae


Alignment Length:216 Identity:93/216 - (43%)
Similarity:135/216 - (62%) Gaps:15/216 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SQYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGD 66
            |:||||||:|::|:.||||||||:||||:.:|..::.|:|:||:::.|||.|:.|.||||||||.
Yeast     3 SEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ 67

  Fly    67 ERFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVR 131
            |||:::..|||||:|||::|||:|..:||..:..||:||.|.::.:|..:|||||||..|.|.|.
Yeast    68 ERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVE 132

  Fly   132 MEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEP 196
            .:....:|:...:.|.|.||....||.|.|..::..|...:.....|..:  |:.||...     
Yeast   133 YDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETT--QKKEDKGN----- 190

  Fly   197 INLAGKDRQRAKDSNT---CC 214
            :||.|:..     :||   ||
Yeast   191 VNLKGQSL-----TNTGGGCC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 76/156 (49%)
YPT1NP_116615.1 Rab1_Ypt1 7..172 CDD:206661 79/164 (48%)

Return to query results.
Submit another query.