DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab9Fb and Rab6a

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_038948673.1 Gene:Rab6a / 84379 RGDID:619737 Length:211 Species:Rattus norvegicus


Alignment Length:153 Identity:66/153 - (43%)
Similarity:94/153 - (61%) Gaps:0/153 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSL 72
            ||::.||:..|||:.|:.||..:.|...:..|:|:||..:.:.|..|.|.||:|||||.|||:||
  Rat    14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 78

  Fly    73 LPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQGFN 137
            :|||.|.:...::|||||:..||:....|:.::|......|.:||||||.|..|.|||.:|:|..
  Rat    79 IPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 143

  Fly   138 YANHRALGFYEVSAKSGANVNDV 160
            .|....:.|.|.|||:|.||..:
  Rat   144 KAKELNVMFIETSAKAGYNVKQL 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 66/153 (43%)
Rab6aXP_038948673.1 Rab6 14..173 CDD:206654 66/153 (43%)

Return to query results.
Submit another query.