DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RABG3E

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_175355.1 Gene:RABG3E / 841353 AraportID:AT1G49300 Length:206 Species:Arabidopsis thaliana


Alignment Length:196 Identity:71/196 - (36%)
Similarity:112/196 - (57%) Gaps:22/196 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKS 71
            |.|:::|||.||||:.|:.::.:.:|:.::..|:|.||..:.|:...|:..||||||||.|||:|
plant     8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQS 72

  Fly    72 LLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSS----ESVNVMLVGNKCD-DLDNRQVR 131
            |..::||||...:||||:.|:|||.:::.|.:|....:|    |:...:::|||.| |..:.:|.
plant    73 LGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPFVVIGNKIDVDGGSSRVV 137

  Fly   132 MEQGFN--YANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETE----DTA 190
            .|:...  .|:...:.:||.|||.|.||.|.|..:           |.|.:..|:|.|    ||.
plant   138 SEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCI-----------TTNAMKSGEEEEMYLPDTI 191

  Fly   191 E 191
            :
plant   192 D 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 63/163 (39%)
RABG3ENP_175355.1 Rab7 9..182 CDD:206655 66/183 (36%)

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