DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab9Fb and RABG3B

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_173688.1 Gene:RABG3B / 838880 AraportID:AT1G22740 Length:203 Species:Arabidopsis thaliana


Alignment Length:162 Identity:64/162 - (39%)
Similarity:100/162 - (61%) Gaps:7/162 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKS 71
            |.|:::|||.||||:.|:.::.:|:|::::..|:|.||..:.:::..|:|.||||||||.|||:|
plant     8 LLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQIWDTAGQERFQS 72

  Fly    72 LLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSE----SVNVMLVGNKCD-DLDNRQVR 131
            |..::||||...:||||:...|||.::|.|..|....:|.    :...:|:|||.| |..|.:|.
plant    73 LGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPFILLGNKVDIDGGNSRVV 137

  Fly   132 MEQGFN--YANHRALGFYEVSAKSGANVNDVF 161
            .|:...  .|....:.::|.|||...||:|.|
plant   138 SEKKAREWCAEKGNIVYFETSAKEDYNVDDSF 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 63/161 (39%)
RABG3BNP_173688.1 Rab7 9..180 CDD:206655 63/161 (39%)

Return to query results.
Submit another query.