DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and ARA-2

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_172128.1 Gene:ARA-2 / 837151 AraportID:AT1G06400 Length:216 Species:Arabidopsis thaliana


Alignment Length:219 Identity:81/219 - (36%)
Similarity:123/219 - (56%) Gaps:20/219 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
            :||||||::::||.|||||.||.||:.|.|..:...|:|::|..:..::.|::|..|||||||.|
plant     9 EYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQE 73

  Fly    68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRM 132
            |::::..:|||||.|.||:||:|...:|.|...||:|:|..:..::.|||:|||||......|:.
plant    74 RYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKT 138

  Fly   133 EQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPI 197
            |:...:|...:|.|.|.||....||.:.|..:...|:.   |.:...:.||.|:.|         
plant   139 EEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHK---IVSKRSVDGGGESAD--------- 191

  Fly   198 NLAGK-DRQRAKDSNT------CC 214
             |.|| :....|:..:      ||
plant   192 -LPGKGETINVKEDGSVLKRMGCC 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 65/156 (42%)
ARA-2NP_172128.1 Rab11_like 11..175 CDD:206660 68/163 (42%)

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