DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RABA1f

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_200894.1 Gene:RABA1f / 836207 AraportID:AT5G60860 Length:217 Species:Arabidopsis thaliana


Alignment Length:212 Identity:84/212 - (39%)
Similarity:122/212 - (57%) Gaps:5/212 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
            :||||||::::||.|||||.||.||:.|.|:.:...|:|::|..|::.:..::|..|||||||.|
plant     9 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQE 73

  Fly    68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRM 132
            |::::..:|||||.|.|||||:|...:|.|::.||||:|..:..::.:|.||||.|....|.|..
plant    74 RYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVST 138

  Fly   133 EQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPI 197
            |....:|......|.|.||....||.:.|..:...|| |:|  :...|..|.  :..|.|..:.|
plant   139 EDAKAFAERENTFFMETSALESMNVENAFTEVLSQIY-RVV--SRKALDIGD--DPAALPKGQTI 198

  Fly   198 NLAGKDRQRAKDSNTCC 214
            |:..||...|.....||
plant   199 NVGSKDDVSAVKKVGCC 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 65/156 (42%)
RABA1fNP_200894.1 Rab11_like 11..175 CDD:206660 68/163 (42%)

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