DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and SGP1

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_200295.1 Gene:SGP1 / 835574 AraportID:AT5G54840 Length:288 Species:Arabidopsis thaliana


Alignment Length:175 Identity:46/175 - (26%)
Similarity:79/175 - (45%) Gaps:22/175 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KILVLGDIGVGKSCLLMRF---SDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE-RF 69
            ||.:|||...||:..::::   .:..|.|    ..|::...:...:.|..:...|||..||| |.
plant   103 KISLLGDCQTGKTTFVVKYVGDENQSFLE----MTGLNLMDKTFYVQGVTISFSIWDVGGDEKRS 163

  Fly    70 KSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRM-- 132
            |..:|...:.|..||.::|:||..:..::.||..:.|:.:..::.: |:|.|.||.    ||:  
plant   164 KDHIPIACKDAVAILFMFDLTSRSTLNSVFGWYSQARKWNKTAIPI-LIGTKFDDF----VRLPP 223

  Fly   133 -------EQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYN 170
                   .|...||.......:..||....|||.:|..:...::|
plant   224 NLQWTIVTQARAYAKVMNASLFFSSATHNINVNKIFKFILARLFN 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 45/168 (27%)
SGP1NP_200295.1 Spg1 103..283 CDD:206701 46/175 (26%)

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