DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RABG1

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_568566.1 Gene:RABG1 / 833958 AraportID:AT5G39620 Length:204 Species:Arabidopsis thaliana


Alignment Length:161 Identity:64/161 - (39%)
Similarity:97/161 - (60%) Gaps:9/161 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSLL 73
            ||::|||.||||:.||.|::|..|.:.|..|:.:|...:.:.:|.|.|:||||||||.||||||.
plant     7 KIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQERFKSLP 71

  Fly    74 PSYYRGAHGILLVYDITSSKSFRNIDGWLKE-IRRMSSESVN---VMLVGNKCDDLDN---RQVR 131
            ..:||.....:||||:.:.|:|.:||.|..| |::.:.|:..   .:|:||| .|::|   |.|.
plant    72 SRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNK-TDVNNGKPRVVA 135

  Fly   132 MEQGFNYANHRA-LGFYEVSAKSGANVNDVF 161
            .|....:...:. :.::|.|||:..||.:.|
plant   136 KEIADQWCGSKGNIVYFETSAKAKINVEEAF 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 64/161 (40%)
RABG1NP_568566.1 P-loop containing Nucleoside Triphosphate Hydrolases 6..179 CDD:476819 64/161 (40%)

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