DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RABH1e

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_196588.3 Gene:RABH1e / 830890 AraportID:AT5G10260 Length:207 Species:Arabidopsis thaliana


Alignment Length:206 Identity:73/206 - (35%)
Similarity:116/206 - (56%) Gaps:20/206 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSL 72
            :|::.|||..|||:.::.||..::|...:..|:|:||..:.:.|..|.|.||:|||||.|||:||
plant    10 YKLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 74

  Fly    73 LPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQGFN 137
            :|||.|.:...::|||:.:.:||.|...|::::|......|.::|||||.|.:|.|||.:|:|.|
plant    75 IPSYIRDSSVAVIVYDVANRQSFLNTSKWIEDVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGDN 139

  Fly   138 YANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPD-EPINL-- 199
            .|....:.|.|.|||:|.|:..:|..::..:             .|.||..:.:..| ..:||  
plant   140 KARDYGVIFIETSAKAGFNIKPLFRKIAAAL-------------PGMETLSSTKQEDMVDVNLKT 191

  Fly   200 ----AGKDRQR 206
                |..::||
plant   192 SSNSAQGEQQR 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 64/156 (41%)
RABH1eNP_196588.3 Rab6 10..170 CDD:206654 64/159 (40%)

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