DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RABH1c

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_195699.1 Gene:RABH1c / 830148 AraportID:AT4G39890 Length:214 Species:Arabidopsis thaliana


Alignment Length:162 Identity:60/162 - (37%)
Similarity:101/162 - (62%) Gaps:1/162 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSL 72
            ||::.|||..|||:.::.||..::|...:..|:|:||..:.:.|..|.|.||:|||||.|||:||
plant    10 FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 74

  Fly    73 LPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSES-VNVMLVGNKCDDLDNRQVRMEQGF 136
            :|||.|.:...::|||:::.::|.|...|::::.|...:| |.::|||||.|.::.|||.:.:|.
plant    75 IPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGE 139

  Fly   137 NYANHRALGFYEVSAKSGANVNDVFNMLSVGI 168
            :......:.|.|.|||...|:..:|..::..:
plant   140 DKGKEYGVMFIETSAKENFNIKALFRKIAAAL 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 60/157 (38%)
RABH1cNP_195699.1 Rab6 10..171 CDD:206654 60/160 (38%)

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