DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RABG3A

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001154217.1 Gene:RABG3A / 826558 AraportID:AT4G09720 Length:217 Species:Arabidopsis thaliana


Alignment Length:174 Identity:58/174 - (33%)
Similarity:103/174 - (59%) Gaps:20/174 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKS 71
            |.|::||||.||||:.|:.::...:|:.::..|:|.||..:.:::..::|.||||||||.|||:|
plant     8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQS 72

  Fly    72 LLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMS---------------SESVNVMLVGNK 121
            |..::||||....||||:...:||.|::.|.:|..:.:               .::...:::|||
plant    73 LGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMWTIAEASPSDPKTFPFIVLGNK 137

  Fly   122 CDDLD---NRQVRMEQGFNY-ANHRALGFYEVSAKSGANVNDVF 161
            . |:|   :|.|..::..:: |::..:.::|.|||...||::.|
plant   138 I-DVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAF 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 57/173 (33%)
RABG3ANP_001154217.1 Rab7 9..193 CDD:206655 57/173 (33%)

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