DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and ARA6

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_567008.1 Gene:ARA6 / 824649 AraportID:AT3G54840 Length:202 Species:Arabidopsis thaliana


Alignment Length:154 Identity:65/154 - (42%)
Similarity:93/154 - (60%) Gaps:1/154 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELA-GRMVMLQIWDTAGDERFKSL 72
            |:::|||.||||||:::||...:|......|||..|..:.:.|. ...|..:||||||.||:.:|
plant    35 KLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSAL 99

  Fly    73 LPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQGFN 137
            .|.|||||...::||||||.:||:....|:||:::..|..:.:.|||||.|..:.|:|..|.|..
plant   100 APLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGME 164

  Fly   138 YANHRALGFYEVSAKSGANVNDVF 161
            .|....:.|.|.|||:..|:|.:|
plant   165 LAEKNGMFFIETSAKTADNINQLF 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 65/154 (42%)
ARA6NP_567008.1 Rab5_related 33..196 CDD:206653 65/154 (42%)

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