DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and SGP2

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_850622.1 Gene:SGP2 / 821724 AraportID:AT3G21700 Length:292 Species:Arabidopsis thaliana


Alignment Length:168 Identity:40/168 - (23%)
Similarity:80/168 - (47%) Gaps:7/168 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KILVLGDIGVGKSCLLMRF-SDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSL 72
            ||.:|||..:||:..|.:: .:.:..|......|::...:.:.:.|..:...||:..|.||.:..
plant   108 KISLLGDPEIGKTSFLAKYVGEEKEVEMRELEKGINCTDKTLYMGGARISYSIWELEGAERSRDQ 172

  Fly    73 LPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDD-----LDNRQVRM 132
            :|...:.:..||.::|:||..:..::..|.::.|:.:..::.|| ||.|.|:     :|.:....
plant   173 IPVACKDSVAILFMFDLTSRCTLNSVISWYQQARKSNQTAIPVM-VGTKFDEFIQLPIDLQWTIA 236

  Fly   133 EQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYN 170
            .|...||.......:..||....|||.:|..::..:::
plant   237 SQARTYAKALNATLFFSSASYNINVNKIFKFVTAKLFD 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 40/161 (25%)
SGP2NP_850622.1 Spg1 107..289 CDD:206701 40/168 (24%)

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