DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RAB7B

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_188512.1 Gene:RAB7B / 821415 AraportID:AT3G18820 Length:206 Species:Arabidopsis thaliana


Alignment Length:212 Identity:74/212 - (34%)
Similarity:118/212 - (55%) Gaps:29/212 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKS 71
            |.|:::|||.||||:.|:.::.:.:|:.::..|:|.||..:.|:...|:..||||||||.|||:|
plant     8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQS 72

  Fly    72 LLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSS----ESVNVMLVGNKCD-DLDNRQVR 131
            |..::||||...:||||:.|.|||.|::.|.:|....:|    |:...:|:|||.| |..|.:|.
plant    73 LGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLIGNKVDVDDGNSRVV 137

  Fly   132 MEQGFN--YANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETE----DTA 190
            .|:...  .|:...:.::|.|||.|.||.:.|..::           .:.|..|:|.|    || 
plant   138 SEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIA-----------KDALKSGEEEELYLPDT- 190

  Fly   191 EPPDEPINLAGKDRQRA 207
                  |::...::||:
plant   191 ------IDVGTSNQQRS 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 64/163 (39%)
RAB7BNP_188512.1 Rab7 9..182 CDD:206655 66/183 (36%)

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