DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RABG3c

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_188231.1 Gene:RABG3c / 820855 AraportID:AT3G16100 Length:206 Species:Arabidopsis thaliana


Alignment Length:209 Identity:73/209 - (34%)
Similarity:120/209 - (57%) Gaps:23/209 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKS 71
            |.|:::|||.||||:.|:.:|.:.:|:.::..|:|.||..:.|::..|:..||||||||.|||:|
plant     8 LLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWDTAGQERFQS 72

  Fly    72 LLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSS----ESVNVMLVGNKCDDLD---NRQ 129
            |..::||||...:||.|:...|||.|::.|.:|....:|    |:...:::||| .|:|   :|.
plant    73 LGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPFVVLGNK-TDVDGGKSRV 136

  Fly   130 VRMEQGFNY-ANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPP 193
            |..::..:: |:...:.::|.|||.|.||:..|..::           .|.|.  .|.|:....|
plant   137 VTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIA-----------KNALK--NEPEEEVYLP 188

  Fly   194 DEPINLAGKDRQRA 207
            | .|::||..:||:
plant   189 D-TIDVAGARQQRS 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 61/164 (37%)
RABG3cNP_188231.1 Rab7 9..182 CDD:206655 64/186 (34%)

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