DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab9Fb and RABE1e

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_187601.1 Gene:RABE1e / 820148 AraportID:AT3G09900 Length:218 Species:Arabidopsis thaliana


Alignment Length:219 Identity:101/219 - (46%)
Similarity:137/219 - (62%) Gaps:19/219 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SQYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGD 66
            |.||||.|:|::||.||||||||:||||:.||...:.|:|:||::|.|||.|:.:.||||||||.
plant    10 SDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74

  Fly    67 ERFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCD-DLDNRQV 130
            |||:::..:|||||.|||||||:|...||.||..|:|.|.:.:|:|||.:|||||.| |...|.|
plant    75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKADMDESKRAV 139

  Fly   131 RMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDE 195
            ...:|...|:...:.|:|.|||:..||..||..::..|..||.           |::..|||  :
plant   140 PTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLT-----------ESDTKAEP--Q 191

  Fly   196 PINLAGKDRQRAKDSNT-----CC 214
            .|.:..:|..:|..|:|     ||
plant   192 GIKITKQDANKASSSSTNEKSACC 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 82/157 (52%)
RABE1eNP_187601.1 Rab8_Rab10_Rab13_like 13..180 CDD:206659 86/166 (52%)

Return to query results.
Submit another query.