DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RAB6A

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_181989.1 Gene:RAB6A / 819069 AraportID:AT2G44610 Length:208 Species:Arabidopsis thaliana


Alignment Length:205 Identity:74/205 - (36%)
Similarity:111/205 - (54%) Gaps:22/205 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSL 72
            :|::.|||..|||:.::.||..::|...:..|:|:||..:.:.|..|.|.||:|||||.|||:||
plant    10 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 74

  Fly    73 LPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQGFN 137
            :|||.|.:...::|||:.|.:||.|...|:.|:|......|.|:|||||.|.:|.|||.:|:...
plant    75 IPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEAEA 139

  Fly   138 YANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPD-EPINLAG 201
            .|....:.|.|.|||:|.|:..:|..::..:             .|.||..:.:..| ..:||  
plant   140 KARELNVMFIETSAKAGFNIKALFRKIAAAL-------------PGMETLSSTKQEDMVDVNL-- 189

  Fly   202 KDRQRAKDSN 211
                  |.||
plant   190 ------KSSN 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 65/156 (42%)
RAB6ANP_181989.1 Rab6 10..170 CDD:206654 65/159 (41%)

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