DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and ArRABA1h

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_180943.4 Gene:ArRABA1h / 817957 AraportID:AT2G33870 Length:218 Species:Arabidopsis thaliana


Alignment Length:211 Identity:84/211 - (39%)
Similarity:124/211 - (58%) Gaps:4/211 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            ||||||:::.||.|||||.||.||:.|.|:.....|:|::|..|::::..::|..|||||||.||
plant    10 YDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQER 74

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            ::::..:|||||.|.|||||:|...:|.|::.||||:|..:..:..:||||||.|....|.:..|
plant    75 YRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKADLNHLRAISTE 139

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPIN 198
            :..::|......|.|.||....||.:.|..:...|| |:|  :...|..|.: ..||.|..:.||
plant   140 EVKDFAERENTFFMETSALEAINVENAFTEVLTQIY-RVV--SKKALDAGDD-PTTALPKGQMIN 200

  Fly   199 LAGKDRQRAKDSNTCC 214
            :..:|...|...:.||
plant   201 VGSRDDVSAVKKSGCC 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 65/156 (42%)
ArRABA1hNP_180943.4 Rab11_like 11..175 CDD:206660 68/163 (42%)

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