DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and Rab11b

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_116006.1 Gene:Rab11b / 79434 RGDID:68369 Length:218 Species:Rattus norvegicus


Alignment Length:196 Identity:76/196 - (38%)
Similarity:115/196 - (58%) Gaps:5/196 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
            :||||||::::||.|||||.||.||:.|.|..:...|:|::|..|::::.|:.:..|||||||.|
  Rat     7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQE 71

  Fly    68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRM 132
            |::::..:|||||.|.||||||....::.|::.||||:|..:..::.:||||||.|....|.|..
  Rat    72 RYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPT 136

  Fly   133 EQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIY-----NRLVIHTPNRLSGGQETEDTAEP 192
            ::...:|....|.|.|.||....||.:.|..:...||     .::.....:..|.|....|.:.|
  Rat   137 DEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAHDESPGNNVVDISVP 201

  Fly   193 P 193
            |
  Rat   202 P 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 65/156 (42%)
Rab11bNP_116006.1 Rab11_like 9..173 CDD:206660 68/163 (42%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q15907 36..47 3/10 (30%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q15907 67..86 10/18 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..218 5/19 (26%)

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