DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rab6a

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001315458.1 Gene:rab6a / 793785 ZFINID:ZDB-GENE-040426-2849 Length:208 Species:Danio rerio


Alignment Length:204 Identity:75/204 - (36%)
Similarity:113/204 - (55%) Gaps:22/204 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSL 72
            ||::.||:..|||:.|:.||..:.|...:..|:|:||..:.:.|..|.|.||:|||||.|||:||
Zfish    14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 78

  Fly    73 LPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQGFN 137
            :|||.|.:...::|||||:..||:....|:.::|......|.:||||||.|..|.|||.:|:|..
Zfish    79 IPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGER 143

  Fly   138 YANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTA----------EP 192
            .|....:.|.|.|||:|.||..:|..::..            |.|.:.|:|.:          :|
Zfish   144 KAKELNVMFIETSAKAGYNVKQLFRRVAAA------------LPGMESTQDKSREDMIDIKLEKP 196

  Fly   193 PDEPINLAG 201
            |::|::..|
Zfish   197 PEQPVSEGG 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 67/156 (43%)
rab6aNP_001315458.1 Rab6 14..174 CDD:206654 67/171 (39%)

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