DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rabl2b

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001072451.1 Gene:rabl2b / 779905 XenbaseID:XB-GENE-979695 Length:225 Species:Xenopus tropicalis


Alignment Length:197 Identity:65/197 - (32%)
Similarity:98/197 - (49%) Gaps:16/197 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSLL 73
            ||:.|||..||||.|:.||..:.|..:.:.|..:.....:..:.|..|::..|||||.|||.|:.
 Frog    23 KIICLGDSAVGKSKLMERFLMDGFRPQQLSTFALTLYKYSTCVDGNTVLVDFWDTAGQERFHSMH 87

  Fly    74 PSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQ-GFN 137
            .|||..||..::|:|:....:::|:..|.:|:|....| :..::|.||.|    ..:|:.| |||
 Frog    88 ASYYHKAHACIMVFDVQRKITYKNLGKWYQELREYRPE-IPCIVVANKID----ADIRVTQKGFN 147

  Fly   138 YANHRALGFYEVSAKSGANVNDVFN---MLSVG-------IYNRLVIHTPNRLSGGQETEDTAEP 192
            :.....|.||.|||..|.||..:|.   .|:|.       ..:.::....|.....||.||.:|.
 Frog   148 FGKKHNLPFYFVSAADGTNVVKLFKDAIKLAVSYKQNSQDFLDEVMRELENFELEKQEAEDLSEK 212

  Fly   193 PD 194
            .|
 Frog   213 ED 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 56/159 (35%)
rabl2bNP_001072451.1 RabL2 22..182 CDD:133324 58/163 (36%)

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