DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and Rab35

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_937806.1 Gene:Rab35 / 77407 MGIID:1924657 Length:201 Species:Mus musculus


Alignment Length:211 Identity:85/211 - (40%)
Similarity:132/211 - (62%) Gaps:14/211 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            ||:|||:|::||.|||||.||:||:||.|:..::.|:|:||::|.||:.|..|.||||||||.||
Mouse     5 YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQER 69

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            |:::..:||||.||:::|||:||::||.|:..||.||.: :.:.|..:|||||.||.:.:.|..|
Mouse    70 FRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ-NCDDVCRILVGNKNDDPERKVVETE 133

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPIN 198
            ..:.:|....:..:|.|||...||.::||.::     .||:..        :.::.|:...:..|
Mouse   134 DAYKFAGQMGIQLFETSAKENVNVEEMFNCIT-----ELVLRA--------KKDNLAKQQQQQQN 185

  Fly   199 LAGKDRQRAKDSNTCC 214
            ...|..:.:|....||
Mouse   186 DVVKLTKNSKRKKRCC 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 74/156 (47%)
Rab35NP_937806.1 Rab35 3..201 CDD:133310 83/209 (40%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q15286 30..42 4/11 (36%)
Effector region. /evidence=ECO:0000250 37..45 2/7 (29%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q15286 64..80 8/15 (53%)

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