DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and Rab13

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_080953.1 Gene:Rab13 / 68328 MGIID:1927232 Length:202 Species:Mus musculus


Alignment Length:203 Identity:85/203 - (41%)
Similarity:132/203 - (65%) Gaps:9/203 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            ||:|||:|::||.||||:||::||:::.|...::.|:|:||::|.|::.|:.:.||:|||||.||
Mouse     5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQER 69

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            ||::..:|||||.||:||||||..|||.||..|:|.|:..:|..|..:|:|||||....|||:.|
Mouse    70 FKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQRE 134

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPIN 198
            |....|....:.|:|.||||..||::.|:.|:..|..:         :||:.:...::|....:.
Mouse   135 QAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK---------TGGRRSGTNSKPSSTGLK 190

  Fly   199 LAGKDRQR 206
            .:.|.:.:
Mouse   191 TSDKKKNK 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 76/156 (49%)
Rab13NP_080953.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 80/165 (48%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P62820 31..45 3/13 (23%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P62820 63..80 10/16 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..202 4/25 (16%)

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