DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab9Fb and RAB17

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_016860182.1 Gene:RAB17 / 64284 HGNCID:16523 Length:338 Species:Homo sapiens


Alignment Length:128 Identity:53/128 - (41%)
Similarity:76/128 - (59%) Gaps:2/128 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKS 71
            :||:::||...||||.|.:|:..|.| :..:.|||..|..:.|::....:.|:||||||.|::.|
Human    19 VFKLVLLGSGSVGKSSLALRYVKNDF-KSILPTVGCAFFTKVVDVGATSLKLEIWDTAGQEKYHS 82

  Fly    72 LLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEI-RRMSSESVNVMLVGNKCDDLDNRQVRME 133
            :...|:|||:..|||||||...||.....|||:: ..:....|.|||||||.|....|:|..:
Human    83 VCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQEREVTFQ 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 53/127 (42%)
RAB17XP_016860182.1 P-loop containing Nucleoside Triphosphate Hydrolases 20..>146 CDD:476819 53/127 (42%)

Return to query results.
Submit another query.