DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rab28

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001025601.1 Gene:rab28 / 594989 XenbaseID:XB-GENE-478294 Length:221 Species:Xenopus tropicalis


Alignment Length:202 Identity:68/202 - (33%)
Similarity:104/202 - (51%) Gaps:8/202 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRM-VMLQIWDTAGDER 68
            |...||::|||...||:.|.|||:...|.:::..|||:||.::.:.|.|.: |.||:.|..|...
 Frog    10 DRQIKIVILGDGACGKTSLAMRFAQESFGKQYKQTVGIDFFLKRITLPGNLNVTLQVLDIGGQTI 74

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVN---VMLVGNKCDDLDNRQV 130
            ...:|..|..|..|:|||||||:.:||.|::.|...:::::.||..   |.|||||.|....|.|
 Frog    75 GGKMLDKYIYGTQGVLLVYDITNYQSFENLEDWFSMVKKVNDESETQPFVALVGNKIDLEHMRTV 139

  Fly   131 RMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGI----YNRLVIHTPNRLSGGQETEDTAE 191
            :.::...:.....||.|.||||:|.:|...|..::..|    .|:..|....|:........:.|
 Frog   140 KADKHQRFCQENNLGSYFVSAKTGDSVFLCFQRVAAEILGIKLNKAEIEQSQRVVKADIVNYSQE 204

  Fly   192 PPDEPIN 198
            |....:|
 Frog   205 PVTRMVN 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 60/160 (38%)
rab28NP_001025601.1 Rab28 13..221 CDD:206694 67/199 (34%)

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