DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RAB3B

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_002858.2 Gene:RAB3B / 5865 HGNCID:9778 Length:219 Species:Homo sapiens


Alignment Length:193 Identity:76/193 - (39%)
Similarity:116/193 - (60%) Gaps:3/193 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            :||:||:|::|:..|||:..|.|::|:.||...|.|||:||:|:.|....:.|.||||||||.||
Human    19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQER 83

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            ::::..:|||||.|.:|:||||:.:||..:..|..:|:..|.::..|:|||||||..:.|.|..|
Human    84 YRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTE 148

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRL---VIHTPNRLSGGQETEDTAEPP 193
            :|...|......|:|.|||...:|...|..|...|.:::   :...|:.|...:.|..:..||
Human   149 KGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSLDTDPSMLGSSKNTRLSDTPP 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 67/156 (43%)
RAB3BNP_002858.2 Rab3 22..186 CDD:206657 69/163 (42%)
Switch 1. /evidence=ECO:0000269|PubMed:35871249, ECO:0007744|PDB:8A4B 45..58 6/12 (50%)
Switch 2. /evidence=ECO:0000269|PubMed:35871249, ECO:0007744|PDB:8A4B 78..96 9/17 (53%)

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