DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RAB2A

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_002856.1 Gene:RAB2A / 5862 HGNCID:9763 Length:212 Species:Homo sapiens


Alignment Length:182 Identity:80/182 - (43%)
Similarity:117/182 - (64%) Gaps:3/182 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            |.||||.:::||.||||||||::|:|.||...|..|:|::|..|.:.:.|:.:.||||||||.|.
Human     3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQES 67

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            |:|:..||||||.|.|||||||...:|.::..||::.|:.|:.::.:||:|||.|....|:|:.|
Human    68 FRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKE 132

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRL---VIHTPNRLSG 182
            :|..:|....|.|.|.|||:.:||.:.|...:..||.::   |....|..:|
Human   133 EGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANG 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 72/156 (46%)
RAB2ANP_002856.1 PLN03108 1..188 CDD:178655 80/182 (44%)
Required for interaction with PRKCI. /evidence=ECO:0000269|PubMed:14570876 2..19 9/15 (60%)
Switch 1. /evidence=ECO:0000250|UniProtKB:P61106 37..42 2/4 (50%)
Switch 2. /evidence=ECO:0000250|UniProtKB:P61106 63..72 5/8 (63%)

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