DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rab33ba

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001028764.1 Gene:rab33ba / 572060 ZFINID:ZDB-GENE-050809-122 Length:239 Species:Danio rerio


Alignment Length:211 Identity:73/211 - (34%)
Similarity:121/211 - (57%) Gaps:21/211 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERF-K 70
            :|||:|:||.||||:||..||...:|.:|...|:|:|||.:.:|:.|..:.:|:|||||.||| |
Zfish    26 IFKIIVIGDSGVGKTCLTYRFCAGKFPDKTEATIGVDFREKVIEIDGEKIKVQLWDTAGQERFRK 90

  Fly    71 SLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMS-SESVNVMLVGNKCDDLDNRQVRMEQ 134
            |::..|||..|.::.|||:|::.|||::..|::|.|:.: .:.|..:|||||||.....||..:.
Zfish    91 SMVQHYYRNVHAVVFVYDVTNAASFRSLPAWIEECRQHALGQEVPRILVGNKCDLRHAAQVSTDV 155

  Fly   135 GFNYANHRALGFYEVSAKS-------GANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEP 192
            ...:|:..::..:|.|||:       ..|.:|....:.:.:.::|....|..||         :|
Zfish   156 AQQFADTHSMPLFETSAKNPYGNEDGTQNNSDHVEAIFMTVAHKLKSQKPLVLS---------QP 211

  Fly   193 P---DEPINLAGKDRQ 205
            |   .:.:.|..:|::
Zfish   212 PCGYGDTVTLRRQDQE 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 65/165 (39%)
rab33baNP_001028764.1 Rab33B_Rab33A 25..202 CDD:133315 66/175 (38%)

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