DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rab6ba

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001029351.1 Gene:rab6ba / 558900 ZFINID:ZDB-GENE-050809-136 Length:215 Species:Danio rerio


Alignment Length:210 Identity:72/210 - (34%)
Similarity:109/210 - (51%) Gaps:28/210 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGR-------MVMLQIWDTAG 65
            ||::.||:..|||:.|:.||..:.|...:..|:|:||..:.:.|..|       ...||:|||||
Zfish    14 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTLGVSDLQARLQLWDTAG 78

  Fly    66 DERFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQV 130
            .|||:||:|||.|.:...::|||||:..||:....|:.::|......|.:||||||.|..|.||:
Zfish    79 QERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQI 143

  Fly   131 RMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTA----- 190
            .:|:|...|...::.|.|.|||:|.||..:|..::..            |.|.:..::|:     
Zfish   144 TIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVAAA------------LPGMESMQETSKEGMI 196

  Fly   191 ----EPPDEPINLAG 201
                :.|.||....|
Zfish   197 DIKLDKPQEPPTTEG 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 65/163 (40%)
rab6baNP_001029351.1 Rab6 14..181 CDD:206654 65/178 (37%)

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