DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rab19

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001017246.1 Gene:rab19 / 550000 XenbaseID:XB-GENE-495128 Length:213 Species:Xenopus tropicalis


Alignment Length:216 Identity:79/216 - (36%)
Similarity:122/216 - (56%) Gaps:19/216 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            :|:||||:::||..|||:|::.||....|......|:|:||.|||:.:.|:.|.:|:|||||.||
 Frog    12 FDFLFKIILIGDSNVGKTCVVHRFQSGVFAHNQQNTIGVDFTVRNMNINGKKVKVQVWDTAGQER 76

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            |:::..||||.|||.::.||||..:||.::..|:.|..:..:.::.:||:|||.|..:.||:..|
 Frog    77 FRTITQSYYRSAHGAIIAYDITRRQSFESVPHWIYEAEKYGAANLMMMLIGNKSDLAEKRQILFE 141

  Fly   134 QGFNYA-NHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIH----TPNRLSGGQETEDTAEPP 193
            :....| .|..|...|.|||...||::||.:::..:..|...|    :| |.|...:::....||
 Frog   142 EACTLAEKHGLLAVLETSAKESHNVDEVFLLMAKELIARNTFHYHSESP-RNSFMLDSKPVLAPP 205

  Fly   194 DEPINLAGKDRQRAKDSNTCC 214
             ||            |.|..|
 Frog   206 -EP------------DKNCLC 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 65/157 (41%)
rab19NP_001017246.1 Rab19 13..177 CDD:133267 67/163 (41%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 37..52 3/14 (21%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 72..87 8/14 (57%)

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