DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rab9Fb and rab15

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001016372.1 Gene:rab15 / 549126 XenbaseID:XB-GENE-495026 Length:212 Species:Xenopus tropicalis


Alignment Length:217 Identity:84/217 - (38%)
Similarity:124/217 - (57%) Gaps:16/217 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDE 67
            |||.||::|::||.||||:|||.||:||.|...|:.|:|:||:::.:|:.|..|.:|||||||.|
 Frog     4 QYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHPSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQE 68

  Fly    68 RFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRM 132
            |::::...|||.|.||.|||||||.:|:::|..|..::...:.:.|..:|:|||.|:...|||..
 Frog    69 RYQTITKQYYRRAQGIFLVYDITSERSYQHIMKWASDVDEYAPDGVQKILIGNKADEEQKRQVGK 133

  Fly   133 EQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPI 197
            .||...|....:.|:|.||.:..|:.:.|..|:     .||:....|     |.|.......:.:
 Frog   134 NQGMKLAEEYGMDFFETSACTNYNIKESFTRLT-----ELVLMAHKR-----ELEGLRMSSADEL 188

  Fly   198 NLA------GKDRQRAKDSNTC 213
            |||      .|....|..|.:|
 Frog   189 NLAELEDDGSKSDGMANSSKSC 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 67/156 (43%)
rab15NP_001016372.1 Rab15 9..172 CDD:206698 70/167 (42%)

Return to query results.
Submit another query.