DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RAB23

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_057361.3 Gene:RAB23 / 51715 HGNCID:14263 Length:237 Species:Homo sapiens


Alignment Length:229 Identity:65/229 - (28%)
Similarity:109/229 - (47%) Gaps:36/229 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSLL 73
            |::|:|:..||||.::.|:....||:.:..|:|:||..|.:::....|.|.:|||||.|.|.::.
Human    11 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAIT 75

  Fly    74 PSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQGFNY 138
            .:|||||...:||:..|..:||..:..|.:::.....: :..:||.||.|.||:..::.|:....
Human    76 KAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVGD-IPTVLVQNKIDLLDDSCIKNEEAEAL 139

  Fly   139 ANHRALGFYEVSAKSGANVNDVFNMLS------------------------VGIYNRLVIHTPNR 179
            |....|.||..|.|...|||:||..|:                        :|::|         
Human   140 AKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQIAEDPELTHSSSNKIGVFN--------- 195

  Fly   180 LSGGQETEDTAEPPD--EPINLAGKDRQRAKDSN 211
            .|||..:...:...:  :.|||....::..|:.|
Human   196 TSGGSHSGQNSGTLNGGDVINLRPNKQRTKKNRN 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 54/155 (35%)
RAB23NP_057361.3 Rab23_like 10..169 CDD:133306 55/158 (35%)

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