DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and RAB6B

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_057661.3 Gene:RAB6B / 51560 HGNCID:14902 Length:208 Species:Homo sapiens


Alignment Length:80 Identity:18/80 - (22%)
Similarity:33/80 - (41%) Gaps:20/80 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 RDVDKATALKGICDPRLHILQLSLGSDESIANFAEKVSE----IVGE------------SGLTLL 85
            ||.::...:.|    .|.:...|..|:..:|:|:..|..    :||.            ||.|..
Human   981 RDREQGQCVNG----DLKVELRSYVSEPELASFSGDVPRPSLGLVGSESRYQTLPGRGLSGSTSR 1041

  Fly    86 INNAAVMLPYVTKQK 100
            :..::.:.||||.::
Human  1042 LQQSSTIAPYVTLRR 1056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 18/80 (23%)
RAB6BNP_057661.3 Rab6 14..174 CDD:206654
Switch 1. /evidence=ECO:0000269|PubMed:16790928, ECO:0007744|PDB:2FE4, ECO:0007744|PDB:2FFQ 39..49
Switch 2. /evidence=ECO:0000269|PubMed:16790928, ECO:0007744|PDB:2FE4, ECO:0007744|PDB:2FFQ 71..87
Blue background indicates that the domain is not in the aligned region.

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