DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and Rab10

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_059055.2 Gene:Rab10 / 50993 RGDID:620879 Length:200 Species:Rattus norvegicus


Alignment Length:188 Identity:89/188 - (47%)
Similarity:119/188 - (63%) Gaps:5/188 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDER 68
            ||.|||:|::||.||||:|:|.||||:.|....:.|:|:||:::.|||.|:.:.||||||||.||
  Rat     6 YDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 70

  Fly    69 FKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRME 133
            |.::..||||||.||:||||||:.|||.||..||:.|...::|.|..||:|||||..|.|.|...
  Rat    71 FHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDKRVVPKG 135

  Fly   134 QGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNR-----LSGGQET 186
            :|...|....:.|:|.|||:..|:...|..|:..|..:..:..||.     .|||..|
  Rat   136 KGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSENVDISSGGGVT 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 78/156 (50%)
Rab10NP_059055.2 Rab8_Rab10_Rab13_like 7..173 CDD:206659 82/165 (50%)

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