DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and Rab19

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001019497.1 Gene:Rab19 / 500088 RGDID:1565263 Length:217 Species:Rattus norvegicus


Alignment Length:204 Identity:72/204 - (35%)
Similarity:119/204 - (58%) Gaps:8/204 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERF 69
            |||||::::||..|||:|::..|....::|....|:|:||.||::|:.|:.|.:|:|||||.|||
  Rat    15 DYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERF 79

  Fly    70 KSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQ 134
            :::..||||.||..::.||:|...:|.::..|:.||.:..:.::.:||:|||.|..:.|.|..|.
  Rat    80 RTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFED 144

  Fly   135 GFNYA-NHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPD-EPI 197
            ....| .:..|...|.|||...|:::||.:::..:..|..:|    |.|  |:.....|.| .|:
  Rat   145 ACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKELIARNSLH----LYG--ESAQQGLPQDSSPV 203

  Fly   198 NLAGKDRQR 206
            .:|....:|
  Rat   204 LVAHVPSER 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 59/157 (38%)
Rab19NP_001019497.1 Rab19 15..179 CDD:133267 62/163 (38%)
Switch 1. /evidence=ECO:0000250|UniProtKB:Q9H0U4 39..54 3/14 (21%)
Switch 2. /evidence=ECO:0000250|UniProtKB:Q9H0U4 74..89 8/14 (57%)

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