DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and Rab18

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_524744.2 Gene:Rab18 / 44360 FlyBaseID:FBgn0015794 Length:197 Species:Drosophila melanogaster


Alignment Length:211 Identity:81/211 - (38%)
Similarity:121/211 - (57%) Gaps:20/211 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DYLFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERF 69
            |...|:||:|:.|||||.|:.||.:|:|.:.|..|:||||:.:.:::.|....:.:|||||.|||
  Fly     3 DRAIKLLVIGESGVGKSSLIRRFVENKFDQNHDVTIGMDFKSKVMQVDGIDYKVALWDTAGAERF 67

  Fly    70 KSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMS-SESVNVMLVGNKCDDLDNRQVRME 133
            :||.||:||.|.|.:|||||||..|...::.||.|:...| :.::.:::||||.|  :.|.|..|
  Fly    68 RSLTPSFYRKALGAILVYDITSRDSLVKLETWLAELDSYSDNPNIAIIVVGNKID--EERVVDRE 130

  Fly   134 QGFNYA-NHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPI 197
            :|..:| .|||| |.|.|||....|:|||..:...|.:....:..|..:|              :
  Fly   131 EGRKFARKHRAL-FIETSAKCDQFVSDVFKDVVEKIVSSEYFNNGNASAG--------------L 180

  Fly   198 NLAGKDRQRAKDSNTC 213
            ::| .||.....::||
  Fly   181 DIA-SDRDLEASASTC 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 72/158 (46%)
Rab18NP_524744.2 Rab18 6..165 CDD:206656 72/161 (45%)

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