DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and Rab7

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_524472.1 Gene:Rab7 / 42841 FlyBaseID:FBgn0015795 Length:207 Species:Drosophila melanogaster


Alignment Length:215 Identity:78/215 - (36%)
Similarity:118/215 - (54%) Gaps:22/215 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKS 71
            |.|:::|||..|||:.|:.::.:.||:.::..|:|.||..:.|.:..|:|.:|||||||.|||:|
  Fly     8 LLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWDTAGQERFQS 72

  Fly    72 LLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSS----ESVNVMLVGNKCDDLDNRQV-- 130
            |..::||||...:||||:|:..||:|:|.|..|....:|    :....:::|||. |||||||  
  Fly    73 LGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVLGNKV-DLDNRQVST 136

  Fly   131 -RMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPD 194
             |.:|.....|.  :.:||.|||.|.||...|.:::           .|.|....|.|...:.||
  Fly   137 RRAQQWCQSKND--IPYYETSAKEGINVEMAFQVIA-----------KNALELEAEAEVINDFPD 188

  Fly   195 EPINLAGKDRQRAKDSNTCC 214
            : |.|..::.:.....|..|
  Fly   189 Q-ITLGSQNNRPGNPDNCQC 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 67/163 (41%)
Rab7NP_524472.1 Rab7 9..179 CDD:206655 69/183 (38%)

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