DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and rab41

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_998530.1 Gene:rab41 / 406674 ZFINID:ZDB-GENE-040426-2686 Length:211 Species:Danio rerio


Alignment Length:190 Identity:70/190 - (36%)
Similarity:106/190 - (55%) Gaps:2/190 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FKILVLGDIGVGKSCLLMRFSDNRFTEKHVCTVGMDFRVRNVELAGRMVMLQIWDTAGDERFKSL 72
            ||::.||:..|||:.|:.||..:.|...:..|:|:||..:.:.|..|.|.||:|||||.|||:||
Zfish    17 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSL 81

  Fly    73 LPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCDDLDNRQVRMEQGFN 137
            :|||.|.:...::|||||:..||:....|:.::|......|.:||||||.|..|.|||.:|....
Zfish    82 IPSYIRDSTIAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLGDKRQVSVEAAEK 146

  Fly   138 YANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDEPI 197
            .|....:.:.|.|||:|.||..:|..::..:..  :..||.:...........:||:.|:
Zfish   147 KARELGVMYIETSAKAGYNVKQLFRRVAAALPG--MDSTPEKSKEDMIDIKLEKPPELPV 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 65/156 (42%)
rab41NP_998530.1 Rab6 17..177 CDD:206654 65/159 (41%)

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