DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab9Fb and Rab26

DIOPT Version :10

Sequence 1:NP_727472.1 Gene:Rab9Fb / 32029 FlyBaseID:FBgn0052670 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001097658.1 Gene:Rab26 / 40359 FlyBaseID:FBgn0086913 Length:410 Species:Drosophila melanogaster


Alignment Length:213 Identity:83/213 - (38%)
Similarity:119/213 - (55%) Gaps:18/213 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QYDYLFKILVLGDIGVGKSCLLMRFSDNRFTEKH-VCTVGMDFRVRNVELAGRMVMLQIWDTAGD 66
            ::|.:.|:::|||.||||:.||:||.|.|:...: :.|||:|||.:.|.:.|..|.||||||||.
  Fly   208 EFDIMGKVIMLGDSGVGKTSLLIRFRDGRYVPSYFLSTVGIDFRNKVVVVDGTRVKLQIWDTAGQ 272

  Fly    67 ERFKSLLPSYYRGAHGILLVYDITSSKSFRNIDGWLKEIRRMSSESVNVMLVGNKCD-DLDNRQV 130
            |||:|:..:|||.||.:||:||:|:..::.||..||.|||..:.|.|.::|:|||.| ....|||
  Fly   273 ERFRSVTHAYYRDAHALLLLYDVTNKTTYDNIRAWLGEIREYAQEDVVIVLIGNKADCSGSERQV 337

  Fly   131 RMEQGFNYANHRALGFYEVSAKSGANVNDVFNMLSVGIYNRLVIHTPNRLSGGQETEDTAEPPDE 195
            :.|.|........:.|.|.|||:|.||...|..::..:.:|           |.|..|     |.
  Fly   338 KREDGERLGREHNVPFMETSAKTGLNVELSFTAVARQLKSR-----------GYEHGD-----DG 386

  Fly   196 PINLAGKDRQRAKDSNTC 213
            ..|:....|...|..:.|
  Fly   387 KFNVHDFVRDNTKARSVC 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab9FbNP_727472.1 Rab 8..165 CDD:206640 73/158 (46%)
Rab26NP_001097658.1 Rab26 214..407 CDD:206695 82/207 (40%)

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